ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oaaC2 - ECOD Domain | ECOD

ECOD/Domains/e6oaaC2

e6oaaC2

UID: 002508886

PDB

Range: C:659-716,C:750-782
PDB: 6OAA chain C(all domains)
UniProt: P25694 (all domains)
Gene: CDC48

Molecule: Cell division control protein 48

3D Structure

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Related Domains

Browse other domains in Vps4_C,AAA_lid_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyVps4_C,AAA_lid_3(148.1.3.6)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Vps4 C terminal oligomerisation domain

ClanCL0671AAA_lid

PF17862AAA_lid_3

AAA+ lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 6OAA RCSB PDB: 6OAA PDBe: 6OAA UniProt: P25694

Downloads

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