ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rdbT2 - ECOD Domain | ECOD

ECOD/Domains/e6rdbT2

e6rdbT2

UID: 002509108

PDB

Range: T:151-435
PDB: 6RDB chain T(all domains)
UniProt: A0ZW40 (all domains)
Gene: atp1

Molecule: ATP synthase subunit alpha

3D Structure

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Related Domains

Browse other domains in ATP-synt_ab →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyATP-synt_ab(2004.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ATPATP
drugDrugBank DB00171
Magnesium ion

Pfam Families

PF00006ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6RDB RCSB PDB: 6RDB PDBe: 6RDB UniProt: A0ZW40

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.