ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6p81A3 - ECOD Domain | ECOD

ECOD/Domains/e6p81A3

e6p81A3

UID: 002512949

PDB

Range: A:245-366
PDB: 6P81 chain A(all domains)

Molecule: Ubiquitin-like protein SMT3,Beta sliding clamp

3D Structure

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Related Domains

Browse other domains in DNA_pol3_beta_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA clamp(227)

HH-groupDNA clamp(227.1)

TT-groupDNA clamp(227.1.1)

FFamilyDNA_pol3_beta_3(227.1.1.8)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02768DNA_pol3_beta_3

DNA polymerase III beta subunit, C-terminal domain

ClanCL0060DNA_clamp

External Links

ECOD PDB View: 6P81 RCSB PDB: 6P81 PDBe: 6P81

Downloads

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