ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6oq7A1 - ECOD Domain | ECOD

ECOD/Domains/e6oq7A1

e6oq7A1

UID: 002515123

PDB

Range: A:91-542
PDB: 6OQ7 chain A(all domains)
UniProt: M4NKV9 (all domains)
Gene: tcdB

Molecule: Toxin B

3D Structure

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Related Domains

Browse other domains in TcdA_TcdB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyTcdA_TcdB(7516.1.1.25)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435
alpha-D-glucopyranoseGLC
Magnesium ionMG

Pfam Families

PF12919TcdA_TcdB

TcdA/TcdB catalytic glycosyltransferase domain

ClanCL0110GT-A

External Links

ECOD PDB View: 6OQ7 RCSB PDB: 6OQ7 PDBe: 6OQ7 UniProt: M4NKV9

Downloads

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metal

MANGANESE (II) IONMN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.