ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mo4A1 - ECOD Domain | ECOD

ECOD/Domains/e6mo4A1

e6mo4A1

UID: 002516369

PDB

Range: A:-3-299
PDB: 6MO4 chain A(all domains)
UniProt: P47205 (all domains)
Gene: lpxC

Molecule: UDP-3-O-acyl-N-acetylglucosamine deacetylase

3D Structure

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Related Domains

Browse other domains in LpxC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyLpxC(212.1.1.15)

Ligands

in contact, ≤ 4 Å

N-[(2R)-1-(hydroxyamino)-3-methyl-3-(methylsulfonyl)-1-oxobutan-2-yl]-4-(6-hydroxyhexa-1,3-diyn-1-yl)benzamideJWM
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UDP-3-O-acyl N-acetylglycosamine deacetylase

ClanCL0329S5

External Links

ECOD PDB View: 6MO4 RCSB PDB: 6MO4 PDBe: 6MO4 UniProt: P47205

Downloads

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