ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qruA1 - ECOD Domain | ECOD

ECOD/Domains/e6qruA1

e6qruA1

UID: 002516525

PDB

Range: A:2-388
PDB: 6QRU chain A(all domains)
UniProt: P24300 (all domains)
Gene: xylA

Molecule: Xylose isomerase

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
MANGANESE (II) IONMN
metal
Sodium ionNA

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6QRU RCSB PDB: 6QRU PDBe: 6QRU UniProt: P24300

Downloads

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metal

+ 2 additives (Isopropyl alcohol, 1,2-ETHANEDIOL)

Isopropyl alcoholIPA
DrugBank DB02325
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.