ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rqpA1 - ECOD Domain | ECOD

ECOD/Domains/e6rqpA1

e6rqpA1

UID: 002516622

PDB

Range: A:5-233
PDB: 6RQP chain A(all domains)
UniProt: P02945 (all domains)
Gene: bop

Molecule: Bacteriorhodopsin

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROLLI1
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC
RetinalRET

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 6RQP RCSB PDB: 6RQP PDBe: 6RQP UniProt: P02945

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.