ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6qajB3 - ECOD Domain | ECOD

ECOD/Domains/e6qajB3

e6qajB3

UID: 002518930

PDB

Range: B:59-138
PDB: 6QAJ chain B(all domains)
UniProt: Q13263 (all domains)
Gene: TRIM28

Molecule: Endolysin,Transcription intermediary factor 1-beta

3D Structure

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Related Domains

Browse other domains in zf-RING_5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-RING_5(376.1.1.27)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14634zf-RING_5

zinc-RING finger domain

ClanCL0229RING

External Links

ECOD PDB View: 6QAJ RCSB PDB: 6QAJ PDBe: 6QAJ UniProt: Q13263

Downloads

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