ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6o75A3 - ECOD Domain | ECOD

ECOD/Domains/e6o75A3

e6o75A3

UID: 002520844

PDB

Range: A:497-674
PDB: 6O75 chain A(all domains)
UniProt: B6YWB8 (all domains)
Gene: csm1

Molecule: CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)

3D Structure

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Related Domains

Browse other domains in Cas10-Cmr2_palm2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyCas10-Cmr2_palm2(304.48.1.31)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22335Cas10-Cmr2_palm2

Cas10/Cmr2, second palm domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 6O75 RCSB PDB: 6O75 PDBe: 6O75 UniProt: B6YWB8

Downloads

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