ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6p4jC1 - ECOD Domain | ECOD

ECOD/Domains/e6p4jC1

e6p4jC1

UID: 002521423

PDB

Range: C:29-223
PDB: 6P4J chain C(all domains)
UniProt: Q2V8W4 (all domains)

Molecule: Capsid protein VP1 (Coat protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat(10.2.1.13)

Pfam Families

PF00915Calici_coat

Calicivirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6P4J RCSB PDB: 6P4J PDBe: 6P4J UniProt: Q2V8W4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure