ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6imeA1 - ECOD Domain | ECOD

ECOD/Domains/e6imeA1

e6imeA1

UID: 002526771

PDB

Range: A:12-296
PDB: 6IME chain A(all domains)
UniProt: P9WFF7 (all domains)
Gene: uppS

Molecule: Decaprenyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

S-[(2E)-3,7-DIMETHYLOCTA-2,6-DIENYL] TRIHYDROGENTHIODIPHOSPHATEGST
drugDrugBank DB04702
3-methylbut-3-enylsulfanyl(phosphonooxy)phosphinic acidISY
Magnesium ion

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 6IME RCSB PDB: 6IME PDBe: 6IME UniProt: P9WFF7

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.