ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6e5bK1 - ECOD Domain | ECOD

ECOD/Domains/e6e5bK1

e6e5bK1

UID: 002526990

PDB

Range: K:1-203
PDB: 6E5B chain K(all domains)
UniProt: P28062 (all domains)
Gene: PSMB8

Molecule: Proteasome subunit beta type-8

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

[(1R)-3-methyl-1-[[1-[2-[(2,3,4-trimethoxyphenyl)carbonylamino]ethyl]-1,2,3-triazol-4-yl]carbonylamino]butyl]-tris(oxidanyl)boronHUJ
Sodium ionNA
metal
Thiocyanate ionSCN

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 6E5B RCSB PDB: 6E5B PDBe: 6E5B UniProt: P28062

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.