ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jo2A1 - ECOD Domain | ECOD

ECOD/Domains/e6jo2A1

e6jo2A1

UID: 002527325

PDB

Range: A:2-98
PDB: 6JO2 chain A(all domains)
UniProt: P0A3C9 (all domains)
Gene: petF1

Molecule: Ferredoxin-1

3D Structure

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Related Domains

Browse other domains in Fer2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFer2(221.1.1.1)

Ligands

in contact, ≤ 4 Å

FE2/S2 (INORGANIC) CLUSTERFES
BenzamidineBEN
within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

2Fe-2S iron-sulfur cluster binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 6JO2 RCSB PDB: 6JO2 PDBe: 6JO2 UniProt: P0A3C9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.