ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3jyuA2 - ECOD Domain | ECOD

ECOD/Domains/e3jyuA2

e3jyuA2

UID: 002528826

PDB

Range: A:139-228
PDB: 3JYU chain A(all domains)
UniProt: P35123 (all domains)
Gene: Usp4

Molecule: Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.4.19.12) (Deubiquitinating enzyme 4) (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Ubiquitous nuclear protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ubiquitin_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_3(221.1.1.53)

Pfam Families

PF14836Ubiquitin_3

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 3JYU RCSB PDB: 3JYU PDBe: 3JYU UniProt: P35123

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure