ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ndgS21 - ECOD Domain | ECOD

ECOD/Domains/e5ndgS21

e5ndgS21

UID: 002531816

PDB

Range: S2:34-108
PDB: 5NDG chain S2(all domains)
UniProt: P25443 (all domains)
Gene: RPS2

Molecule: Small ribosomal subunit protein uS5 (40S ribosomal protein S2) (Omnipotent suppressor protein SUP44) (RP12) (S4) (YS5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitectureextended segments(a.20)

XX-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274)

HH-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1)

TT-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1.1)

FFamilyRibosomal_S5(3274.1.1.1)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 5NDG RCSB PDB: 5NDG PDBe: 5NDG UniProt: P25443

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure