ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6itbB1 - ECOD Domain | ECOD

ECOD/Domains/e6itbB1

e6itbB1

UID: 002534760

PDB

Range: B:88-361
PDB: 6ITB chain B(all domains)
UniProt: P12870 (all domains)
Gene: alpha

Molecule: Capsid protein alpha (EC 3.4.23.44) [Cleaved into: Capsid protein beta (Coat protein beta) (Nodavirus endopeptidase); Membrane-lytic peptide gamma (Coat protein gamma)]

3D Structure

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Related Domains

Browse other domains in Peptidase_A6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPeptidase_A6(10.2.1.22)

Pfam Families

PF01829Peptidase_A6

Peptidase A6 family

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6ITB RCSB PDB: 6ITB PDBe: 6ITB UniProt: P12870

Downloads

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