ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6itfB1 - ECOD Domain | ECOD

ECOD/Domains/e6itfB1

e6itfB1

UID: 002534763

PDB

Range: B:91-335
PDB: 6ITF chain B(all domains)
UniProt: P12870 (all domains)
Gene: alpha

Molecule: Capsid protein alpha (EC 3.4.23.44) [Cleaved into: Capsid protein beta (Coat protein beta) (Nodavirus endopeptidase); Membrane-lytic peptide gamma (Coat protein gamma)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_A6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPeptidase_A6(10.2.1.22)

Pfam Families

PF01829Peptidase_A6

Peptidase A6 family

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6ITF RCSB PDB: 6ITF PDBe: 6ITF UniProt: P12870

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure