ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6mvoB2 - ECOD Domain | ECOD

ECOD/Domains/e6mvoB2

e6mvoB2

UID: 002535494

PDB

Range: B:1-354
PDB: 6MVO chain B(all domains)
UniProt: P26664 (all domains)

Molecule: RNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

6-[(7-chloro-1-hydroxy-1,3-dihydro-2,1-benzoxaborol-5-yl)(methylsulfonyl)amino]-5-cyclopropyl-2-(4-fluorophenyl)-N-methyl-1-benzofuran-3-carboxamideK4P

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 6MVO RCSB PDB: 6MVO PDBe: 6MVO UniProt: P26664

Downloads

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Drug annotations from DrugDomain.