ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6px3C2 - ECOD Domain | ECOD

ECOD/Domains/e6px3C2

e6px3C2

UID: 002537258

PDB

Range: C:-71-4
PDB: 6PX3 chain C(all domains)
UniProt: P0CH09 (all domains)
Gene: RPL40B

Molecule: Ubiquitin-ribosomal protein eL40B fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40B (60S ribosomal protein L40-B) (CEP52)]

3D Structure

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Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6PX3 RCSB PDB: 6PX3 PDBe: 6PX3 UniProt: P0CH09

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