ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rd3F1 - ECOD Domain | ECOD

ECOD/Domains/e6rd3F1

e6rd3F1

UID: 002538340

PDB

Range: F:0-344
PDB: 6RD3 chain F(all domains)
UniProt: D6QLY0 (all domains)
Gene: ompK36

Molecule: OmpK36

3D Structure

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Related Domains

Browse other domains in Porin_1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyPorin_1(5084.5.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233

Shown in the structure viewer.

Pfam Families

PF00267Porin_1

Gram-negative porin

ClanCL0193MBB

External Links

ECOD PDB View: 6RD3 RCSB PDB: 6RD3 PDBe: 6RD3 UniProt: D6QLY0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.