ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6rkaC1 - ECOD Domain | ECOD

ECOD/Domains/e6rkaC1

e6rkaC1

UID: 002540357

PDB

Range: C:103-224
PDB: 6RKA chain C(all domains)

Molecule: Methionine adenosyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in S-AdoMet_synt_M →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyS-AdoMet_synt_M(327.17.1.3)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF02772S-AdoMet_synt_M

S-adenosylmethionine synthetase, central domain

External Links

ECOD PDB View: 6RKA RCSB PDB: 6RKA PDBe: 6RKA

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.