ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6rkaD2 - ECOD Domain | ECOD

ECOD/Domains/e6rkaD2

e6rkaD2

UID: 002540361

PDB

Range: D:4-102
PDB: 6RKA chain D(all domains)

Molecule: Methionine adenosyltransferase

3D Structure

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Related Domains

Browse other domains in S-AdoMet_synt_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupS-adenosylmethionine synthetase(327.17)

TT-groupS-adenosylmethionine synthetase(327.17.1)

FFamilyS-AdoMet_synt_N(327.17.1.1)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF00438S-AdoMet_synt_N

S-adenosylmethionine synthetase, N-terminal domain

External Links

ECOD PDB View: 6RKA RCSB PDB: 6RKA PDBe: 6RKA

Downloads

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Drug annotations from DrugDomain.