ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6preD1 - ECOD Domain | ECOD

ECOD/Domains/e6preD1

e6preD1

UID: 002541108

PDB

Range: D:33-142,D:307-416
PDB: 6PRE chain D(all domains)
UniProt: A0A0H2URJ7 (all domains)
Gene: rafE

Molecule: Sugar ABC transporter, sugar-binding protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyBacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein(7523.1.1.9)

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 6PRE RCSB PDB: 6PRE PDBe: 6PRE UniProt: A0A0H2URJ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure