ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6n6nA1 - ECOD Domain | ECOD

ECOD/Domains/e6n6nA1

e6n6nA1

UID: 002542788

PDB

Range: A:285-495
PDB: 6N6N chain A(all domains)
UniProt: P10121 (all domains)
Gene: ftsY

Molecule: Signal recognition particle receptor FtsY

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

5'-GuanylylmethylenebisphosphonateGCP
drugDrugBank DB03725
Magnesium ionMG
metal

+ 1 additive (Acetate)

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6N6N RCSB PDB: 6N6N PDBe: 6N6N UniProt: P10121

Downloads

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AcetateACT

DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.