ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6nkkB1 - ECOD Domain | ECOD

ECOD/Domains/e6nkkB1

e6nkkB1

UID: 002542799

PDB

Range: B:9-265
PDB: 6NKK chain B(all domains)
UniProt: L0E2Z4 (all domains)
Gene: phqE

Molecule: Short chain dehydrogenase

3D Structure

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Related Domains

Browse other domains in SDR →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilySDR(2003.1.1.122)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
(5aS,12aS,13aS)-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-onePM7

Shown in the structure viewer.

Pfam Families

SDR-like rossmann domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6NKK RCSB PDB: 6NKK PDBe: 6NKK UniProt: L0E2Z4

Downloads

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Drug annotations from DrugDomain.