ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6spdV1 - ECOD Domain | ECOD

ECOD/Domains/e6spdV1

e6spdV1

UID: 002543127

PDB

Range: V:4-100
PDB: 6SPD chain V(all domains)
UniProt: A0A072ZBM5 (all domains)
Gene: rplY

Molecule: Large ribosomal subunit protein bL25 (General stress protein CTC)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L25p →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilyRibosomal_L25p(239.1.1.3)

Pfam Families

PF01386Ribosomal_L25p

Ribosomal L25p family

ClanCL0733Ribosomal_L25

External Links

ECOD PDB View: 6SPD RCSB PDB: 6SPD PDBe: 6SPD UniProt: A0A072ZBM5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure