ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6u88C1 - ECOD Domain | ECOD

ECOD/Domains/e6u88C1

e6u88C1

UID: 002543306

PDB

Range: C:376-561,C:591-729
PDB: 6U88 chain C(all domains)
UniProt: Q9WUD2 (all domains)
Gene: Trpv2

Molecule: Transient receptor potential cation channel subfamily V member 2

3D Structure

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Related Domains

Browse other domains in YVC1_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyYVC1_C(5054.1.1.58)

Ligands

in contact, ≤ 4 Å

CannabidiolP0T
drugDrugBank DB09061

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Calcium channel YVC1-like, C-terminal

ClanCL0030Ion_channel

External Links

ECOD PDB View: 6U88 RCSB PDB: 6U88 PDBe: 6U88 UniProt: Q9WUD2

Downloads

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