ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6pepF1 - ECOD Domain | ECOD

ECOD/Domains/e6pepF1

e6pepF1

UID: 002545555

PDB

Range: F:104-170
PDB: 6PEP chain F(all domains)
UniProt: P35672 (all domains)
Gene: sctC1

Molecule: SPI-1 type 3 secretion system secretin (T3SS-1 secretin) (Protein InvG)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Secretin_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRing-building motif II in type III secretion system(327.16)

TT-groupRing-building motif II in type III secretion system(327.16.1)

FFamilySecretin_N(327.16.1.3)

Pfam Families

PF03958Secretin_N

Bacterial type II/III secretion system short domain

External Links

ECOD PDB View: 6PEP RCSB PDB: 6PEP PDBe: 6PEP UniProt: P35672

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure