ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6je4K6 - ECOD Domain | ECOD

ECOD/Domains/e6je4K6

e6je4K6

UID: 002550475

PDB

Range: K:2-47,K:457-505,K:672-841
PDB: 6JE4 chain K(all domains)
UniProt: C9X1G5 (all domains)
Gene: cas9

Molecule: CRISPR-associated endonuclease Cas9 (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuvC_III →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRuvC_III(2484.1.1.85)

Pfam Families

PF18541RuvC_III

RuvC endonuclease subdomain 3

ClanCL0219RNase_H

External Links

ECOD PDB View: 6JE4 RCSB PDB: 6JE4 PDBe: 6JE4 UniProt: C9X1G5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure