ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jd4B1 - ECOD Domain | ECOD

ECOD/Domains/e6jd4B1

e6jd4B1

UID: 002554016

PDB

Range: B:318-578
PDB: 6JD4 chain B(all domains)
UniProt: P9WNB1 (all domains)
Gene: eccCb1

Molecule: ESX-1 secretion system protein EccCb1

3D Structure

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Related Domains

Browse other domains in FtsK_SpoIIIE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyFtsK_SpoIIIE(2004.1.1.63)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01580FtsK_SpoIIIE

FtsK/SpoIIIE family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6JD4 RCSB PDB: 6JD4 PDBe: 6JD4 UniProt: P9WNB1

Downloads

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