ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6sskE2 - ECOD Domain | ECOD

ECOD/Domains/e6sskE2

e6sskE2

UID: 002562661

PDB

Range: E:1-154
PDB: 6SSK chain E(all domains)
UniProt: P63145 (all domains)
Gene: ERVK-24

Molecule: Endogenous retrovirus group K member 24 Gag polyprotein (HERV-K101 Gag protein) (HERV-K_22q11.21 provirus ancestral Gag polyprotein) (Gag polyprotein)

3D Structure

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Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 6SSK RCSB PDB: 6SSK PDBe: 6SSK UniProt: P63145

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