ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ssmC1 - ECOD Domain | ECOD

ECOD/Domains/e6ssmC1

e6ssmC1

UID: 002562690

PDB

Range: C:155-236
PDB: 6SSM chain C(all domains)
UniProt: P63145 (all domains)
Gene: ERVK-24

Molecule: Endogenous retrovirus group K member 24 Gag polyprotein (HERV-K101 Gag protein) (HERV-K_22q11.21 provirus ancestral Gag polyprotein) (Gag polyprotein)

3D Structure

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Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 6SSM RCSB PDB: 6SSM PDBe: 6SSM UniProt: P63145

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