ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6nkaC1 - ECOD Domain | ECOD

ECOD/Domains/e6nkaC1

e6nkaC1

UID: 002570245

PDB

Range: C:-1-226
PDB: 6NKA chain C(all domains)
UniProt: P9WPQ5 (all domains)
Gene: bioD

Molecule: ATP-dependent dethiobiotin synthetase BioD

3D Structure

Loading viewer...

Related Domains

Browse other domains in AAA_26 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_26(2004.1.1.201)

Ligands

in contact, ≤ 4 Å

DoxecitineDCZ
drugDrugBank DB02594

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 6NKA RCSB PDB: 6NKA PDBe: 6NKA UniProt: P9WPQ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.