ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6td0A2 - ECOD Domain | ECOD

ECOD/Domains/e6td0A2

e6td0A2

UID: 002572942

PDB

Range: A:23-65,A:180-294
PDB: 6TD0 chain A(all domains)
UniProt: Q9F663 (all domains)
Gene: KPC-2

Molecule: Carbapenem-hydrolyzing beta-lactamase KPC

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyBeta-lactamase2(223.3.1.8)

Ligands

in contact, ≤ 4 Å

Vaborbactam4D6
drugDrugBank DB12107

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6TD0 RCSB PDB: 6TD0 PDBe: 6TD0 UniProt: Q9F663

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.