ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vcmA1 - ECOD Domain | ECOD

ECOD/Domains/e6vcmA1

e6vcmA1

UID: 002578328

PDB

Range: A:131-274
PDB: 6VCM chain A(all domains)
UniProt: P0A6K1 (all domains)
Gene: dapF

Molecule: Diaminopimelate epimerase (DAP epimerase) (EC 5.1.1.7) (PLP-independent amino acid racemase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DAP_epimerase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyDAP_epimerase(286.1.1.1)

Pfam Families

PF01678DAP_epimerase

Diaminopimelate epimerase

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 6VCM RCSB PDB: 6VCM PDBe: 6VCM UniProt: P0A6K1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure