ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vcpA1 - ECOD Domain | ECOD

ECOD/Domains/e6vcpA1

e6vcpA1

UID: 002578332

PDB

Range: A:0-160
PDB: 6VCP chain A(all domains)
UniProt: P0A776 (all domains)
Gene: rppH

Molecule: RNA pyrophosphohydrolase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Uridine 5'-triphosphateUTP
drugDrugBank DB04005

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 6VCP RCSB PDB: 6VCP PDBe: 6VCP UniProt: P0A776

Downloads

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