ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jbsD1 - ECOD Domain | ECOD

ECOD/Domains/e6jbsD1

e6jbsD1

UID: 002580111

PDB

Range: D:44-408
PDB: 6JBS chain D(all domains)
UniProt: G8GLP2 (all domains)
Gene: Lxyl-p1-2

Molecule: Beta-D-xylosidase/beta-D-glucosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_3 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_3(2002.1.1.39)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

PF00933Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6JBS RCSB PDB: 6JBS PDBe: 6JBS UniProt: G8GLP2

Downloads

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Drug annotations from DrugDomain.