ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6uxjD1 - ECOD Domain | ECOD

ECOD/Domains/e6uxjD1

e6uxjD1

UID: 002580521

PDB

Range: D:0-308
PDB: 6UXJ chain D(all domains)
UniProt: K4FZF8 (all domains)
Gene: SHMT

Molecule: Serine hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

LevoleucovorinFFO
drugDrugBank DB11596
N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6UXJ RCSB PDB: 6UXJ PDBe: 6UXJ UniProt: K4FZF8

Downloads

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+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.