ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jupF2 - ECOD Domain | ECOD

ECOD/Domains/e6jupF2

e6jupF2

UID: 002582387

PDB

Range: F:0-22,F:76-177
PDB: 6JUP chain F(all domains)
UniProt: W8STT9 (all domains)
Gene: dinB

Molecule: DNA polymerase IV

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyIMS(304.48.1.10)

Ligands

in contact, ≤ 4 Å

2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine0KX
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

impB/mucB/samB family

External Links

ECOD PDB View: 6JUP RCSB PDB: 6JUP PDBe: 6JUP UniProt: W8STT9

Downloads

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