ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ombB2 - ECOD Domain | ECOD

ECOD/Domains/e6ombB2

e6ombB2

UID: 002591562

PDB

Range: B:382-476
PDB: 6OMB chain B(all domains)
UniProt: P25694 (all domains)
Gene: CDC48

Molecule: Cell division control protein 48

3D Structure

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Related Domains

Browse other domains in AAA_lid_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_3(148.1.3.19)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17862AAA_lid_3

AAA+ lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 6OMB RCSB PDB: 6OMB PDBe: 6OMB UniProt: P25694

Downloads

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