ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6kghA1 - ECOD Domain | ECOD

ECOD/Domains/e6kghA1

e6kghA1

UID: 002594408

PDB

Range: A:382-503
PDB: 6KGH chain A(all domains)
UniProt: L0T911 (all domains)
Gene: pbpB

Molecule: Penicillin-binding protein PbpB (Penicillin-binding protein 3) (PBP3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6KGH RCSB PDB: 6KGH PDBe: 6KGH UniProt: L0T911

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure