ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kghA2 - ECOD Domain | ECOD

ECOD/Domains/e6kghA2

e6kghA2

UID: 002594409

PDB

Range: A:314-381,A:503-656
PDB: 6KGH chain A(all domains)
UniProt: L0T911 (all domains)
Gene: pbpB

Molecule: Penicillin-binding protein PbpB (Penicillin-binding protein 3) (PBP3)

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6KGH RCSB PDB: 6KGH PDBe: 6KGH UniProt: L0T911

Downloads

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