ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6pb4F3 - ECOD Domain | ECOD

ECOD/Domains/e6pb4F3

e6pb4F3

UID: 002595396

PDB

Range: F:480-613
PDB: 6PB4 chain F(all domains)
UniProt: P00579 (all domains)
Gene: rpoD

Molecule: RNA polymerase sigma factor RpoD (Sigma-70)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sigma70_r3,Sigma70_r4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma70_r3,Sigma70_r4(101.1.1.30)

Pfam Families

PF04539Sigma70_r3

Sigma-70 region 3

ClanCL0123HTH

PF04545Sigma70_r4

Sigma-70, region 4

ClanCL0123HTH

External Links

ECOD PDB View: 6PB4 RCSB PDB: 6PB4 PDBe: 6PB4 UniProt: P00579

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure