ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vgkJ1 - ECOD Domain | ECOD

ECOD/Domains/e6vgkJ1

e6vgkJ1

UID: 002596131

PDB

Range: J:15-192
PDB: 6VGK chain J(all domains)
UniProt: P9WPC5 (all domains)
Gene: clpP1

Molecule: ATP-dependent Clp protease proteolytic subunit 1 (EC 3.4.21.92) (Endopeptidase Clp 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CLP_protease →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCLP_protease(2486.1.1.2)

Pfam Families

PF00574CLP_protease

Clp protease

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 6VGK RCSB PDB: 6VGK PDBe: 6VGK UniProt: P9WPC5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure