ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6spiK1 - ECOD Domain | ECOD

ECOD/Domains/e6spiK1

e6spiK1

UID: 002598707

PDB

Range: K:1-153
PDB: 6SPI chain K(all domains)
UniProt: P00441 (all domains)
Gene: SOD1

Molecule: Superoxide dismutase [Cu-Zn]

3D Structure

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Related Domains

Browse other domains in Sod_Cu →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCu,Zn superoxide dismutase-like(11.1.3)

FFamilySod_Cu(11.1.3.1)

Ligands

in contact, ≤ 4 Å

~{N}-[(4-chlorophenyl)methyl]-2-selanyl-benzamideLQW
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

Copper/zinc superoxide dismutase (SODC)

External Links

ECOD PDB View: 6SPI RCSB PDB: 6SPI PDBe: 6SPI UniProt: P00441

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.