ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2o1sC3 - ECOD Domain | ECOD

ECOD/Domains/e2o1sC3

e2o1sC3

UID: 002601496

PDB

Range: C:3-182,C:240-291
PDB: 2O1S chain C(all domains)
UniProt: P77488 (all domains)
Gene: dxs

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

Loading viewer...

Related Domains

Browse other domains in DXP_synthase_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyDXP_synthase_N(7574.1.1.11)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Thiamine diphosphateTPP
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13292DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2O1S RCSB PDB: 2O1S PDBe: 2O1S UniProt: P77488

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure