ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5qxiA1 - ECOD Domain | ECOD

ECOD/Domains/e5qxiA1

e5qxiA1

UID: 002605087

PDB

Range: A:979-1108
PDB: 5QXI chain A(all domains)
UniProt: Q6PL18 (all domains)
Gene: ATAD2

Molecule: ATPase family AAA domain-containing protein 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

(4R,4aS,7aS,9S)-3,10-dimethyl-5,6,7,7a,8,9-hexahydro-4H-4a,9-epiminopyrrolo[3',4':5,6]cyclohepta[1,2-d][1,2]oxazol-4-olRGY
(4R,4aR,7aS,9R)-3,10-dimethyl-5,6,7,7a,8,9-hexahydro-4H-4a,9-epiminopyrrolo[3',4':5,6]cyclohepta[1,2-d][1,2]oxazol-4-olTQS

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5QXI RCSB PDB: 5QXI PDBe: 5QXI UniProt: Q6PL18

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.