ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4tn4C3 - ECOD Domain | ECOD

ECOD/Domains/e4tn4C3

e4tn4C3

UID: 002605988

PDB

Range: C:1-290
PDB: 4TN4 chain C(all domains)
UniProt: A5K8L9 (all domains)
Gene: PVX_100730

Molecule: Serine hydroxymethyltransferase

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilySHMT(7577.1.1.5)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4TN4 RCSB PDB: 4TN4 PDBe: 4TN4 UniProt: A5K8L9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4S)-6-amino-4-(5-cyano-3'-fluorobiphenyl-3-yl)-4-cyclobutyl-3-methyl-2,4-dihydropyrano[2,3-c]pyrazole-5-carbonitrile33G

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.