ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6i33B4 - ECOD Domain | ECOD

ECOD/Domains/e6i33B4

e6i33B4

UID: 002607180

PDB

Range: B:504-821
PDB: 6I33 chain B(all domains)
UniProt: P23378 (all domains)
Gene: GLDC

Molecule: Glycine dehydrogenase (decarboxylating), mitochondrial

3D Structure

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Related Domains

Browse other domains in Beta_elim_lyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyBeta_elim_lyase(7577.1.1.8)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01212Beta_elim_lyase

Beta-eliminating lyase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 6I33 RCSB PDB: 6I33 PDBe: 6I33 UniProt: P23378

Downloads

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