ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6pcmA5 - ECOD Domain | ECOD

ECOD/Domains/e6pcmA5

e6pcmA5

UID: 002607438

PDB

Range: A:629-703
PDB: 6PCM chain A(all domains)
UniProt: A0R5D9 (all domains)
Gene: topA

Molecule: DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Toprim_C_rpt →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13)

TT-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13.1)

FFamilyToprim_C_rpt(375.13.1.1)

Pfam Families

PF13368Toprim_C_rpt

Topoisomerase C-terminal repeat

External Links

ECOD PDB View: 6PCM RCSB PDB: 6PCM PDBe: 6PCM UniProt: A0R5D9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure